Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fimHKEGG: enc:ECL_01282 mannose binding protein FimH precursor. (335 aa)    
Predicted Functional Partners:
fimC
PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: enc:ECL_01280 fimbrial chaperone protein.
  
 0.921
fimD_1
PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: enc:ECL_01281 outer membrane usher protein.
  
  0.830
fimA
PFAM: Fimbrial protein, C-terminal; KEGG: enc:ECL_01278 major type 1 subunit fimbrin (pilin).
     
 0.790
AEN63772.1
PFAM: Fimbrial protein, C-terminal; KEGG: enc:ECL_01283 putative fimbrial protein.
     
 0.768
fimI
PFAM: Fimbrial protein, C-terminal; KEGG: enc:ECL_01279 fimbrial protein.
       0.640
lpfA
PFAM: Fimbrial protein, C-terminal; KEGG: cko:CKO_02323 hypothetical protein.
      
 0.623
phoE
PFAM: Porin, Gram-negative type; KEGG: enc:ECL_01073 outer membrane phosphoporin protein E; Belongs to the Gram-negative porin family.
   
  
 0.622
ppdD
KEGG: ent:Ent638_0652 putative major pilin subunit; Belongs to the N-Me-Phe pilin family.
      
 0.618
ampH
PFAM: Beta-lactamase-related; KEGG: enc:ECL_01131 beta-lactam binding protein AmpH.
      
 0.618
ompA
KEGG: ent:Ent638_1469 outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
   
  
 0.618
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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