STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livF_2KEGG: enc:ECL_02957 putative amino acid transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core. (240 aa)    
Predicted Functional Partners:
livH_1
Urea ABC transporter, permease protein UrtB; KEGG: enc:ECL_02016 branched-chain amino acid transport system permease protein; TIGRFAM: ABC transporter, urea, permease protein, UrtB; PFAM: Bacterial inner-membrane translocator.
  
  
  0.929
livM_1
Urea ABC transporter, permease protein UrtC; KEGG: enc:ECL_02015 branched-chain amino acid transport system permease protein; TIGRFAM: ABC transporter, urea, permease protein, UrtC; PFAM: Bacterial inner-membrane translocator.
  
  0.929
amiC_1
Urea ABC transporter, urea binding protein; KEGG: enc:ECL_02017 branched-chain amino acid transport system substrate-binding protein; TIGRFAM: ABC transporter, urea, substrate-binding, UrtA; Twin-arginine translocation pathway, signal sequence; PFAM: Extracellular ligand-binding receptor.
  
 
  0.922
livF_3
KEGG: ent:Ent638_1991 ABC transporter related; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; PFAM: ABC transporter-like.
 
  
 
0.798
artM_4
TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; PFAM: ABC transporter-like; KEGG: enc:ECL_02013 branched-chain amino acid transport system ATP-binding protein; SMART: ATPase, AAA+ type, core.
  
  
 
0.758
livF_7
ABC transporter related protein; KEGG: enc:ECL_04812 branched-chain amino acid transport system ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; Belongs to the ABC transporter superfamily.
  
  
 
0.548
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
  0.507
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.474
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.472
ureD_1
KEGG: enc:ECL_04386 urease accessory protein UreD; HAMAP: Urease accessory protein UreD; PFAM: Urease accessory protein UreD.
  
     0.458
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.