STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN64242.1PFAM: Asp/Glu/hydantoin racemase; KEGG: enc:ECL_02662 allantoin racemase. (247 aa)    
Predicted Functional Partners:
AEN64243.1
Urate catabolism protein; KEGG: enc:ECL_02661 allantoinase; TIGRFAM: Putative urate catabolism protein; PFAM: Polysaccharide deacetylase.
 
  
  0.972
mcbR_1
Transcriptional regulator, GntR family; KEGG: enc:ECL_02663 GntR-type regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
 
     0.912
ybbW_2
PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: enc:ECL_02664 allantoin permease.
 
     0.876
yedX_2
TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase; KEGG: enc:ECL_00086 putative hydroxyisourate hydrolase; SMART: Transthyretin/hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
  
  0.790
yedX_1
KEGG: enc:ECL_02666 hydroxyisourate hydrolase; TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
  0.618
AEN64248.1
Transcriptional regulator, RpiR family; PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: enc:ECL_02655 putative sugar isomerase.
 
     0.519
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.504
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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