Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEN64639.1KEGG: kva:Kvar_0973 hypothetical protein. (160 aa)    
Predicted Functional Partners:
AEN64638.1
PFAM: Protein of unknown function DUF1493; KEGG: spq:SPAB_03607 hypothetical protein.
     
 0.873
AEN64640.1
KEGG: ses:SARI_00061 hypothetical protein; TIGRFAM: Type VI secretion system effector, Hcp1; PFAM: Virulence factor, secretion apparatus.
       0.773
ypwA
PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: enc:ECL_02232 carboxypeptidase Taq.
       0.526
ynfM_1
PFAM: Major facilitator superfamily MFS-1; KEGG: enc:ECL_02222 major facilitator transporter.
       0.460
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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