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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehW_1ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_02215 putative osmoprotectant transport system permease protein. (215 aa)    
Predicted Functional Partners:
opuCC_1
PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: enc:ECL_02214 putative osmoprotectant transport system substrate-binding protein.
 
 0.998
opuCC_2
PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: ent:Ent638_2730 substrate-binding region of ABC-type glycine betaine transport system.
 
 0.995
AEN65194.1
PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: kpe:KPK_2009 quaternary amine uptake ABC transporter (QAT) family, periplasmic amine-binding protein.
 
 0.992
proV_1
TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core; KEGG: enc:ECL_02216 putative osmoprotectant transport system ATP-binding protein; SMART: ATPase, AAA+ type, core; Cystathionine beta-synthase, core.
 0.984
yehW_2
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1924 binding-protein-dependent transport systems inner membrane component.
 
 
 
0.968
yehX
ABC transporter related protein; KEGG: enc:ECL_03439 putative glycine/betaine/choline ABC transporter ATP-binding component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 0.959
AEN65191.1
KEGG: kpe:KPK_2012 quaternary amine uptake ABC transporter (QAT) family, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 0.934
AEN64645.1
Cl- channel voltage-gated family protein; PFAM: Chloride channel, voltage gated; KEGG: enc:ECL_02218 putative voltage-gated ClC-type chloride channel ClcB.
       0.603
yehW_3
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_2727 binding-protein-dependent transport systems inner membrane component.
 
  
 
0.579
yehY
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: enc:ECL_03440 putative glycine/betaine/choline ABC transporter permease component.
 
  
 
0.532
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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