STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN64669.1KEGG: spe:Spro_1793 hypothetical protein. (177 aa)    
Predicted Functional Partners:
AEN64670.1
KEGG: spe:Spro_1795 hypothetical protein.
       0.773
AEN64667.1
KEGG: spe:Spro_1794 hypothetical protein.
      
0.529
AEN64668.1
KEGG: spe:Spro_1795 hypothetical protein.
       0.529
AEN64666.1
KEGG: spe:Spro_1791 hypothetical protein.
       0.436
clpV1_5
TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: pam:PANA_4145 ClpV; SMART: ATPase, AAA+ type, core.
       0.420
AEN64665.1
KEGG: spe:Spro_1790 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; Rhs element Vgr protein, subgroup; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein.
       0.420
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.