Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ynfDPFAM: Protein of unknown function DUF1161; KEGG: enc:ECL_02188 hypothetical protein. (97 aa)    
Predicted Functional Partners:
ynfB
UPF0482 protein ynfB; KEGG: enc:ECL_02185 hypothetical protein; HAMAP: Protein of unknown function DUF1283; PFAM: Protein of unknown function DUF1283.
 
     0.773
yggN
KEGG: enc:ECL_04285 hypothetical protein.
  
     0.748
yidQ
PFAM: Protein of unknown function DUF1375; KEGG: enc:ECL_00014 hypothetical protein.
  
     0.730
yacC
Hypothetical protein; Manually curated; KEGG: enc:ECL_00927 hypothetical protein.
  
     0.730
bssS
KEGG: enc:ECL_02578 biofilm formation regulatory protein BssS.
  
     0.725
yqjE
PFAM: Protein of unknown function DUF2311, membrane; KEGG: ent:Ent638_3553 putative inner membrane protein.
  
    0.718
yjeI
KEGG: enc:ECL_00545 putative outer membrane lipoprotein.
  
     0.701
secM
Secretion monitor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.693
AEN65904.1
HAMAP: UPF0370 protein ypfN; KEGG: ent:Ent638_2968 hypothetical protein.
  
     0.684
yhhL
PFAM: Protein of unknown function DUF1145; KEGG: enc:ECL_04828 hypothetical protein.
  
     0.684
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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