Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
speG_1PFAM: GCN5-related N-acetyltransferase; KEGG: enc:ECL_02186 spermidine N1-acetyltransferase. (186 aa)    
Predicted Functional Partners:
ynfB
UPF0482 protein ynfB; KEGG: enc:ECL_02185 hypothetical protein; HAMAP: Protein of unknown function DUF1283; PFAM: Protein of unknown function DUF1283.
  
  
 0.985
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
     
 0.961
speB
Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.
     
 0.950
speC_2
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: enc:ECL_03025 ornithine decarboxylase.
     
 0.946
speC_3
PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal; KEGG: enc:ECL_04303 ornithine decarboxylase.
     
 0.946
patA_1
PFAM: Aminotransferase class-III; manually curated; TIGRFAM: Putrescine aminotransferase; KEGG: enc:ECL_04458 putrescine--2-oxoglutarate aminotransferase; HAMAP: Putrescine aminotransferase.
   
 
 0.675
puuA_2
PFAM: Glutamine synthetase, catalytic region; KEGG: esc:Entcl_1590 glutamine synthetase catalytic region.
     
 0.664
pheA
Chorismate mutase; KEGG: enc:ECL_03929 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: Chorismate mutase, gammaproteobacteria; PFAM: Prephenate dehydratase; Chorismate mutase, type II.
    
  0.660
glnA
KEGG: enc:ECL_05111 glutamine synthetase; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp.
     
 0.653
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; KEGG: enc:ECL_02962 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.646
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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