Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
raiA | uspG_2 | Entas_3307 | Entas_2011 | KEGG: enc:ECL_03928 translation inhibitor protein RaiA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein. | UspA domain-containing protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family. | 0.410 |
uspE | uspG_2 | Entas_1868 | Entas_2011 | PFAM: UspA; KEGG: enc:ECL_02261 universal stress protein. | UspA domain-containing protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family. | 0.455 |
uspG_2 | raiA | Entas_2011 | Entas_3307 | UspA domain-containing protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family. | KEGG: enc:ECL_03928 translation inhibitor protein RaiA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein. | 0.410 |
uspG_2 | uspE | Entas_2011 | Entas_1868 | UspA domain-containing protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family. | PFAM: UspA; KEGG: enc:ECL_02261 universal stress protein. | 0.455 |
uspG_2 | ydfZ | Entas_2011 | Entas_2010 | UspA domain-containing protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family. | TIGRFAM: Putative selenium-binding protein YdfZ; KEGG: enc:ECL_02177 hypothetical protein. | 0.432 |
ydfZ | uspG_2 | Entas_2010 | Entas_2011 | TIGRFAM: Putative selenium-binding protein YdfZ; KEGG: enc:ECL_02177 hypothetical protein. | UspA domain-containing protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family. | 0.432 |