Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
ydfHKEGG: enc:ECL_02172 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR. (228 aa)    
Predicted Functional Partners:
mcbR_2
KEGG: enc:ECL_01866 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
  
     0.716
mcbR_1
Transcriptional regulator, GntR family; KEGG: enc:ECL_02663 GntR-type regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
  
     0.599
AEN67121.1
GntR domain protein; KEGG: enc:ECL_05126 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
  
    0.593
ydfG
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: enc:ECL_02171 3-hydroxy acid dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.547
AEN66623.1
Regulatory protein GntR HTH; KEGG: ent:Ent638_3662 transcriptional regulator NanR; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR.
  
    0.529
lutR_2
Regulatory protein GntR HTH; KEGG: enc:ECL_04494 DNA-binding transcriptional repressor ExuR; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR.
  
  
 0.522
iclR_2
KEGG: enc:ECL_00269 transcriptional repressor IclR; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal.
  
  
 0.504
ydfI
PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; KEGG: enc:ECL_02178 fructuronate reductase.
   
 0.502
pdhR_1
GntR domain protein; KEGG: enc:ECL_00161 DNA-binding transcriptional repressor LldR; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR.
  
  
 0.500
AEN62923.1
Transcriptional regulator, IclR family; KEGG: enc:ECL_00192 hypothetical protein; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal.
  
  
 0.491
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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