close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysL_2PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ent:Ent638_2994 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
AEN66087.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ent:Ent638_3137 LysR family transcriptional regulator.
  
     0.743
AEN62855.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_00005 LysR family transcriptional regulator.
  
     0.717
oxyR_2
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cko:CKO_01223 hypothetical protein.
  
     0.713
AEN66268.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_04180 LysR family transcriptional regulator.
  
     0.638
AEN65932.1
PFAM: Major facilitator superfamily MFS-1; KEGG: kpu:KP1_4083 major facilitator superfamily transporter.
 
     0.635
AEN65930.1
Hypothetical protein; KEGG: kpn:KPN_02829 putative inner membrane protein.
       0.610
AEN63595.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vpe:Varpa_2322 transcriptional regulator LysR family.
  
     0.588
yhjC
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_01916 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.582
dmlR_1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_02608 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.559
allS_1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_02342 putative DNA-binding transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.479
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.