STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
fadB_2Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (729 aa)    
Predicted Functional Partners:
AEN64771.1
TIGRFAM: Beta-ketoadipyl CoA thiolase; Thiolase; KEGG: enc:ECL_02144 beta-ketoadipyl CoA thiolase.
 0.999
fadI
KEGG: enc:ECL_03683 3-ketoacyl-CoA thiolase; TIGRFAM: Acetyl-CoA C-acyltransferase FadI; Thiolase; HAMAP: Acetyl-CoA C-acyltransferase FadI.
 0.999
thlA_2
TIGRFAM: Thiolase; KEGG: enc:ECL_04179 acetyl-CoA acetyltransferase.
 0.999
fadA
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
 0.999
aidB_2
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; KEGG: enc:ECL_00580 isovaleryl CoA dehydrogenase.
 
 0.996
fadE
PFAM: Protein of unknown function DUF1974; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: enc:ECL_01053 acyl-CoA dehydrogenase.
 
 0.996
AEN65212.1
PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: efe:EFER_0795 hypothetical protein.
  
 0.994
barA_5
KEGG: enc:ECL_04118 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction hi [...]
  
 0.986
rcsC_1
Integral membrane sensor hybrid histidine kinase; KEGG: enc:ECL_03522 two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
   
 0.983
AEN64761.1
Phenylacetic acid degradation protein paaN; KEGG: enc:ECL_02154 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; TIGRFAM: Phenylacetic acid degradation protein paaN; PFAM: MaoC-like dehydratase; Aldehyde dehydrogenase.
  
 0.976
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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