Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB37099.1 | SEB37111.1 | SAMN04489806_0231 | SAMN04489806_0232 | Hypothetical protein. | Hypothetical protein; Manually curated. | 0.462 |
SEB37099.1 | SEB37124.1 | SAMN04489806_0231 | SAMN04489806_0233 | Hypothetical protein. | HEPN domain-containing protein. | 0.462 |
SEB37111.1 | SEB37099.1 | SAMN04489806_0232 | SAMN04489806_0231 | Hypothetical protein; Manually curated. | Hypothetical protein. | 0.462 |
SEB37111.1 | SEB37124.1 | SAMN04489806_0232 | SAMN04489806_0233 | Hypothetical protein; Manually curated. | HEPN domain-containing protein. | 0.835 |
SEB37111.1 | vapC-10 | SAMN04489806_0232 | SAMN04489806_3066 | Hypothetical protein; Manually curated. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.415 |
SEB37111.1 | vapC-8 | SAMN04489806_0232 | SAMN04489806_2091 | Hypothetical protein; Manually curated. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.425 |
SEB37124.1 | SEB37099.1 | SAMN04489806_0233 | SAMN04489806_0231 | HEPN domain-containing protein. | Hypothetical protein. | 0.462 |
SEB37124.1 | SEB37111.1 | SAMN04489806_0233 | SAMN04489806_0232 | HEPN domain-containing protein. | Hypothetical protein; Manually curated. | 0.835 |
vapC-10 | SEB37111.1 | SAMN04489806_3066 | SAMN04489806_0232 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein; Manually curated. | 0.415 |
vapC-10 | vapC-8 | SAMN04489806_3066 | SAMN04489806_2091 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.489 |
vapC-8 | SEB37111.1 | SAMN04489806_2091 | SAMN04489806_0232 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein; Manually curated. | 0.425 |
vapC-8 | vapC-10 | SAMN04489806_2091 | SAMN04489806_3066 | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.489 |