Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB37807.1 | SEB37827.1 | SAMN04489806_0293 | SAMN04489806_0294 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.470 |
SEB37807.1 | SEB37848.1 | SAMN04489806_0293 | SAMN04489806_0295 | Predicted arabinose efflux permease, MFS family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.422 |
SEB37827.1 | SEB37807.1 | SAMN04489806_0294 | SAMN04489806_0293 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.470 |
SEB37827.1 | SEB37848.1 | SAMN04489806_0294 | SAMN04489806_0295 | Hypothetical protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.682 |
SEB37827.1 | SEB37858.1 | SAMN04489806_0294 | SAMN04489806_0296 | Hypothetical protein. | DNA-binding transcriptional regulator, Lrp family. | 0.496 |
SEB37848.1 | SEB37807.1 | SAMN04489806_0295 | SAMN04489806_0293 | Threonine/homoserine/homoserine lactone efflux protein. | Predicted arabinose efflux permease, MFS family. | 0.422 |
SEB37848.1 | SEB37827.1 | SAMN04489806_0295 | SAMN04489806_0294 | Threonine/homoserine/homoserine lactone efflux protein. | Hypothetical protein. | 0.682 |
SEB37848.1 | SEB37858.1 | SAMN04489806_0295 | SAMN04489806_0296 | Threonine/homoserine/homoserine lactone efflux protein. | DNA-binding transcriptional regulator, Lrp family. | 0.881 |
SEB37848.1 | SEC23684.1 | SAMN04489806_0295 | SAMN04489806_2930 | Threonine/homoserine/homoserine lactone efflux protein. | Glutamate synthase (NADH) large subunit. | 0.420 |
SEB37848.1 | pheT | SAMN04489806_0295 | SAMN04489806_2625 | Threonine/homoserine/homoserine lactone efflux protein. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.412 |
SEB37858.1 | SEB37827.1 | SAMN04489806_0296 | SAMN04489806_0294 | DNA-binding transcriptional regulator, Lrp family. | Hypothetical protein. | 0.496 |
SEB37858.1 | SEB37848.1 | SAMN04489806_0296 | SAMN04489806_0295 | DNA-binding transcriptional regulator, Lrp family. | Threonine/homoserine/homoserine lactone efflux protein. | 0.881 |
SEB37858.1 | SEC23684.1 | SAMN04489806_0296 | SAMN04489806_2930 | DNA-binding transcriptional regulator, Lrp family. | Glutamate synthase (NADH) large subunit. | 0.510 |
SEC23684.1 | SEB37848.1 | SAMN04489806_2930 | SAMN04489806_0295 | Glutamate synthase (NADH) large subunit. | Threonine/homoserine/homoserine lactone efflux protein. | 0.420 |
SEC23684.1 | SEB37858.1 | SAMN04489806_2930 | SAMN04489806_0296 | Glutamate synthase (NADH) large subunit. | DNA-binding transcriptional regulator, Lrp family. | 0.510 |
SEC23684.1 | pheT | SAMN04489806_2930 | SAMN04489806_2625 | Glutamate synthase (NADH) large subunit. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.865 |
pheT | SEB37848.1 | SAMN04489806_2625 | SAMN04489806_0295 | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Threonine/homoserine/homoserine lactone efflux protein. | 0.412 |
pheT | SEC23684.1 | SAMN04489806_2625 | SAMN04489806_2930 | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Glutamate synthase (NADH) large subunit. | 0.865 |