STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB80845.1Hypothetical protein. (986 aa)    
Predicted Functional Partners:
SEB80916.1
ABC-type lipoprotein export system, ATPase component.
 
  0.976
SEB80882.1
FtsX-like permease family protein.
 
     0.963
SEB80955.1
Putative ABC transport system ATP-binding protein.
 
  0.948
SEB40316.1
Putative ABC transport system ATP-binding protein.
   
  0.696
SEB51404.1
Putative ABC transport system ATP-binding protein.
   
  0.696
SEB80338.1
Putative ABC transport system ATP-binding protein.
   
  0.696
SEB99104.1
Putative ABC transport system ATP-binding protein.
   
  0.696
SEB58242.1
Hypothetical protein.
  
     0.581
SEB80809.1
Hypothetical protein.
       0.537
SEC59710.1
Ribosome-associated heat shock protein Hsp15.
   
    0.477
Your Current Organism:
Microbacterium humi
NCBI taxonomy Id: 640635
Other names: CCM 7687, DSM 21799, M. humi, Microbacterium humi Young et al. 2010, Microbacterium sp. CC-012309, strain CC-012309, strain CC-12309
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.