STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB81150.1Catechol 2,3-dioxygenase. (295 aa)    
Predicted Functional Partners:
SEB44850.1
Phenol 2-monooxygenase.
    
 0.880
SEB96336.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
    
  0.874
SEB46657.1
2-polyprenyl-6-methoxyphenol hydroxylase.
    
 0.749
SEB81125.1
Acetyl esterase.
       0.628
SEB81184.1
Putative oxidoreductase.
  
    0.599
SEB61737.1
P-hydroxybenzoate 3-monooxygenase.
    
 0.582
SEB77569.1
2-polyprenyl-6-methoxyphenol hydroxylase.
    
 0.582
SEC50668.1
2-polyprenyl-6-methoxyphenol hydroxylase.
    
 0.582
SEC00414.1
Acyl-CoA dehydrogenase.
  
 
  0.533
SEB64113.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
    
 0.517
Your Current Organism:
Microbacterium humi
NCBI taxonomy Id: 640635
Other names: CCM 7687, DSM 21799, M. humi, Microbacterium humi Young et al. 2010, Microbacterium sp. CC-012309, strain CC-012309, strain CC-12309
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.