Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB44743.1 | SEB82365.1 | SAMN04489806_0662 | SAMN04489806_1872 | CsbD-like; Belongs to the UPF0337 (CsbD) family. | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family. | 0.433 |
SEB82291.1 | SEB82327.1 | SAMN04489806_1870 | SAMN04489806_1871 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Signal transduction histidine kinase. | 0.970 |
SEB82291.1 | SEB82365.1 | SAMN04489806_1870 | SAMN04489806_1872 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family. | 0.475 |
SEB82327.1 | SEB82291.1 | SAMN04489806_1871 | SAMN04489806_1870 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.970 |
SEB82327.1 | SEB82365.1 | SAMN04489806_1871 | SAMN04489806_1872 | Signal transduction histidine kinase. | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family. | 0.475 |
SEB82365.1 | SEB44743.1 | SAMN04489806_1872 | SAMN04489806_0662 | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family. | CsbD-like; Belongs to the UPF0337 (CsbD) family. | 0.433 |
SEB82365.1 | SEB82291.1 | SAMN04489806_1872 | SAMN04489806_1870 | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.475 |
SEB82365.1 | SEB82327.1 | SAMN04489806_1872 | SAMN04489806_1871 | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family. | Signal transduction histidine kinase. | 0.475 |