STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB83449.1Glycosyltransferase Family 4. (354 aa)    
Predicted Functional Partners:
SEB83489.1
O-antigen ligase like membrane protein.
 
 
  0.951
SEB83413.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.946
SEB83374.1
Capsular exopolysaccharide family; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.864
SEB83567.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.829
SEB84523.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.762
SEB83878.1
Glycosyltransferase Family 4.
  
     0.750
SEB83525.1
Glycosyltransferase involved in cell wall bisynthesis; Manually curated.
 
    
0.667
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.642
SEB79862.1
Maltooligosyl trehalose hydrolase.
   
 0.619
SEB83727.1
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase.
  
     0.612
Your Current Organism:
Microbacterium humi
NCBI taxonomy Id: 640635
Other names: CCM 7687, DSM 21799, M. humi, Microbacterium humi Young et al. 2010, Microbacterium sp. CC-012309, strain CC-012309, strain CC-12309
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