STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC17370.1Glutathione-independent formaldehyde dehydrogenase. (404 aa)    
Predicted Functional Partners:
SEC17410.1
Imidazolonepropionase.
      0.671
SEC13826.1
Threonine dehydrogenase.
  
  
 
0.664
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.653
SEB45146.1
Phosphoglucomutase.
   
 0.648
SEB67024.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.627
SEB63306.1
Putative autoinducer-2 (AI-2) aldolase.
 
  
  0.625
SEC25297.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.608
SEC24968.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.607
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.599
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.588
Your Current Organism:
Microbacterium humi
NCBI taxonomy Id: 640635
Other names: CCM 7687, DSM 21799, M. humi, Microbacterium humi Young et al. 2010, Microbacterium sp. CC-012309, strain CC-012309, strain CC-12309
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