Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VNG_0562C | VNG_0570H | VNG_0562C | VNG_0570H | Conserved hypothetical protein; Vng0562c. | Hypothetical protein; Vng0570h. | 0.963 |
VNG_0562C | mrpB1 | VNG_0562C | VNG_0566C | Conserved hypothetical protein; Vng0562c. | Conserved hypothetical protein; Vng0566c. | 0.963 |
VNG_0562C | mrpB2 | VNG_0562C | VNG_0564H | Conserved hypothetical protein; Vng0562c. | Hypothetical protein; Vng0564h. | 0.979 |
VNG_0562C | mrpC | VNG_0562C | VNG_0565C | Conserved hypothetical protein; Vng0562c. | Conserved hypothetical protein; Vng0565c. | 0.993 |
VNG_0562C | mrpD2 | VNG_0562C | VNG_0560C | Conserved hypothetical protein; Vng0562c. | Conserved hypothetical protein; Vng0560c. | 0.936 |
VNG_0562C | mrpE | VNG_0562C | VNG_0571C | Conserved hypothetical protein; Vng0562c. | Conserved hypothetical protein; Vng0571c. | 0.986 |
VNG_0562C | ndhG1 | VNG_0562C | VNG_0636G | Conserved hypothetical protein; Vng0562c. | NADH dehydrogenase/oxidoreductase; NdhG1; Belongs to the complex I 20 kDa subunit family. | 0.514 |
VNG_0562C | ndhG2 | VNG_0562C | VNG_0563G | Conserved hypothetical protein; Vng0562c. | NADH dehydrogenase/oxidoreductase; NdhG2. | 0.677 |
VNG_0562C | nolD | VNG_0562C | VNG_0640G | Conserved hypothetical protein; Vng0562c. | NADH dehydrogenase/oxidoreductase-like protein; NolD. | 0.625 |
VNG_0562C | nuoL | VNG_0562C | VNG_0646G | Conserved hypothetical protein; Vng0562c. | F420H2:quinone oxidoreductase chain L; NuoL. | 0.948 |
VNG_0570H | VNG_0562C | VNG_0570H | VNG_0562C | Hypothetical protein; Vng0570h. | Conserved hypothetical protein; Vng0562c. | 0.963 |
VNG_0570H | mrpB1 | VNG_0570H | VNG_0566C | Hypothetical protein; Vng0570h. | Conserved hypothetical protein; Vng0566c. | 0.985 |
VNG_0570H | mrpB2 | VNG_0570H | VNG_0564H | Hypothetical protein; Vng0570h. | Hypothetical protein; Vng0564h. | 0.985 |
VNG_0570H | mrpC | VNG_0570H | VNG_0565C | Hypothetical protein; Vng0570h. | Conserved hypothetical protein; Vng0565c. | 0.997 |
VNG_0570H | mrpD2 | VNG_0570H | VNG_0560C | Hypothetical protein; Vng0570h. | Conserved hypothetical protein; Vng0560c. | 0.963 |
VNG_0570H | mrpE | VNG_0570H | VNG_0571C | Hypothetical protein; Vng0570h. | Conserved hypothetical protein; Vng0571c. | 0.999 |
VNG_0570H | ndhG1 | VNG_0570H | VNG_0636G | Hypothetical protein; Vng0570h. | NADH dehydrogenase/oxidoreductase; NdhG1; Belongs to the complex I 20 kDa subunit family. | 0.667 |
VNG_0570H | ndhG2 | VNG_0570H | VNG_0563G | Hypothetical protein; Vng0570h. | NADH dehydrogenase/oxidoreductase; NdhG2. | 0.987 |
VNG_0570H | nolD | VNG_0570H | VNG_0640G | Hypothetical protein; Vng0570h. | NADH dehydrogenase/oxidoreductase-like protein; NolD. | 0.637 |
VNG_0570H | nuoL | VNG_0570H | VNG_0646G | Hypothetical protein; Vng0570h. | F420H2:quinone oxidoreductase chain L; NuoL. | 0.976 |
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