STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VNG_0726CConserved hypothetical protein; Vng0726c. (196 aa)    
Predicted Functional Partners:
VNG_2334C
Conserved hypothetical protein; Vng2334c.
  
 
 
 0.620
VNG_1035C
Conserved hypothetical protein; Vng1035c.
 
  
 0.481
fbr
Cytochrome-like protein; Fbr.
  
     0.458
opuD
Glycine betaine transporter; OpuD.
 
  
 0.439
VNG_0475C
Conserved hypothetical protein; Vng0475c.
 
  
 0.437
ncsA
Conserved hypothetical protein; Vng0190c.
   
   0.418
VNG_0727C
Conserved hypothetical protein; Vng0727c.
    
 0.412
Your Current Organism:
Halobacterium salinarum
NCBI taxonomy Id: 64091
Other names: H. salinarum NRC-1, Halobacterium halobium NRC-1, Halobacterium salinarum NRC-1, Halobacterium salinarum str. NRC-1, Halobacterium salinarum strain NRC-1, Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081), Halobacterium sp. (strain NRC-1), Halobacterium sp. ATCC 700922, Halobacterium sp. JCM 11081, Halobacterium sp. NRC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.