Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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[Homology]
Score
htr4Htr4 transducer; Potentially involved in chemo- or phototactic signal transduction. (778 aa)    
Predicted Functional Partners:
cheB
Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.780
cheR
Chemotaxis protein; CheR.
 
 
 0.758
cheA
Chemotaxis protein; CheA.
 
   
 0.714
cheW1
Chemotaxis protein; CheW1.
 
 
 0.647
cheW2
Chemotaxis protein; CheW2.
  
 
 0.585
VNG_1920H
Hypothetical protein; Vng1920h.
     
 0.525
gabD
Succinate-semialdehyde dehydrogenase; GabD.
  
    0.488
sop1
Sensory rhodopsin I; Involved in the control of phototaxis. Mediates both photoattractant (in the orange light) and photophobic (in the near UV light) responses. The signal is then transmitted to the sensory rhodopsin I transducer (HTR-I) (By similarity).
    
   0.431
sop2
Sensory rhodopsin II; Photophobic photoreceptor responsible for the negative phototaxis. Activates the sensory rhodopsin II transducer (HTR-II) in response to blue light (By similarity).
    
   0.431
Your Current Organism:
Halobacterium salinarum
NCBI taxonomy Id: 64091
Other names: H. salinarum NRC-1, Halobacterium halobium NRC-1, Halobacterium salinarum NRC-1, Halobacterium salinarum str. NRC-1, Halobacterium salinarum strain NRC-1, Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081), Halobacterium sp. (strain NRC-1), Halobacterium sp. ATCC 700922, Halobacterium sp. JCM 11081, Halobacterium sp. NRC-1
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