STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VNG_1833CConserved hypothetical protein; Vng1833c. (205 aa)    
Predicted Functional Partners:
hyrA
Monooxygenase; HyrA.
       0.572
VNG_1561C
Conserved hypothetical protein; Vng1561c.
 
     0.499
trpS1
tryptophanyl-tRNA synthetase; TrpS1; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.476
trpS2
tryptophanyl-tRNA synthetase; TrpS2; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.476
yurY
ABC transporter, ATP-binding protein; YurY.
     
 0.457
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.455
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; PurC; Belongs to the SAICAR synthetase family. Highly divergent.
  
    0.445
VNG_1832H
Hypothetical protein; Vng1832h.
       0.425
guaAb
GMP synthase subunit B; Catalyzes the synthesis of GMP from XMP.
  
    0.411
panB
Ketopantoate hydroxymethyltransferase-like; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.408
Your Current Organism:
Halobacterium salinarum
NCBI taxonomy Id: 64091
Other names: H. salinarum NRC-1, Halobacterium halobium NRC-1, Halobacterium salinarum NRC-1, Halobacterium salinarum str. NRC-1, Halobacterium salinarum strain NRC-1, Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081), Halobacterium sp. (strain NRC-1), Halobacterium sp. ATCC 700922, Halobacterium sp. JCM 11081, Halobacterium sp. NRC-1
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