STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VNG_2156CConserved hypothetical protein; Vng2156c. (523 aa)    
Predicted Functional Partners:
VNG_0555C
Conserved hypothetical protein; Vng0555c.
 
     0.718
VNG_1795C
Conserved hypothetical protein; Vng1795c.
 
     0.682
VNG_0230C
Conserved hypothetical protein; Vng0230c.
  
     0.653
tot
Transmembrane oligosaccharyl transferase; Tot.
 
     0.613
VNG_0052H
Hypothetical protein encoded by ISH8; Vng0052h.
  
     0.557
VNG_1653H
Hypothetical protein encoded by ISH8; Vng1653h.
  
     0.552
VNG_0059H
Hypothetical protein encoded by ISH8; Vng0059h.
  
     0.551
VNG_0337H
Hypothetical protein encoded by ISH8; Vng0337h.
  
     0.551
VNG_2175H
Hypothetical protein encoded by ISH8; Vng2175h.
  
     0.551
VNG_0573C
Conserved hypothetical protein; Vng0573c.
  
     0.546
Your Current Organism:
Halobacterium salinarum
NCBI taxonomy Id: 64091
Other names: H. salinarum NRC-1, Halobacterium halobium NRC-1, Halobacterium salinarum NRC-1, Halobacterium salinarum str. NRC-1, Halobacterium salinarum strain NRC-1, Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081), Halobacterium sp. (strain NRC-1), Halobacterium sp. ATCC 700922, Halobacterium sp. JCM 11081, Halobacterium sp. NRC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.