STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argGArgininosuccinate synthetase; ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (396 aa)    
Predicted Functional Partners:
VNG_2433H
Hypothetical protein; Vng2433h.
  
  
 0.999
argH
Argininosuccinate lyase; ArgH.
 
 0.999
carB
Carbamoyl-phosphate synthase large subunit; CarB.
 
 
 0.997
carA
Carbamoyl-phosphate synthase small subunit; CarA; Belongs to the CarA family.
  
 
 0.968
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.956
lysC
Aspartokinase II alpha subunit; LysC; Belongs to the aspartokinase family.
 
 
 0.939
asnA
Asparagine synthetase; AsnA.
   
 0.938
aspB1
Aspartate aminotransferase; AspB1.
  
 0.933
aspB2
Aspartate aminotransferase; AspB2.
  
 0.933
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
  
 
 0.927
Your Current Organism:
Halobacterium salinarum
NCBI taxonomy Id: 64091
Other names: H. salinarum NRC-1, Halobacterium halobium NRC-1, Halobacterium salinarum NRC-1, Halobacterium salinarum str. NRC-1, Halobacterium salinarum strain NRC-1, Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081), Halobacterium sp. (strain NRC-1), Halobacterium sp. ATCC 700922, Halobacterium sp. JCM 11081, Halobacterium sp. NRC-1
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