STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZQ94460.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
TR210_609
Lysin motif.
  
     0.650
TR210_576
Ppx/gppa phosphatase.
  
     0.593
CZQ92381.1
Hypothetical protein.
  
  
 0.531
CZQ94448.1
Short-chain dehydrogenase/reductase sdr.
  
    0.523
CZR05322.1
Thiamine transporter thit.
  
     0.515
TR210_852
Hypothetical protein.
 
     0.511
CZQ94408.1
Lysin motif.
  
     0.433
TR210_766
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
     0.422
CZR03191.1
Hypothetical protein.
 
     0.408
CZR07066.1
Mfs/sugar transport protein.
  
    0.406
Your Current Organism:
Trichococcus ilyis
NCBI taxonomy Id: 640938
Other names: DSM 22150, JCM 31247, T. ilyis, Trichococcus ilyis Strepis et al. 2016, Trichococcus sp. DSM 22150, Trichococcus sp. R210, strain R210
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.