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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZQ99762.1Restriction endonuclease type i hsds. (413 aa)    
Predicted Functional Partners:
CZQ99772.1
N-6 adenine-specific dna methylases signature.
 
 0.995
CZQ99752.1
Hypothetical protein.
 
  
 0.969
CZR08068.1
N12 class n6 adenine-specific dna methyltransferase signature.
 
 
 0.862
CZR08080.1
N12 class n6 adenine-specific dna methyltransferase signature.
 
 
 0.787
CZR09905.1
N12 class n6 adenine-specific dna methyltransferase signature.
 
 
 0.751
TR210_795
N-6 adenine-specific dna methylases signature.
 
 
 0.751
TR210_952
N-6 adenine-specific dna methylases signature.
 
 
 0.751
CZR08077.1
Hypothetical protein.
 
 
 0.692
polA
Dna polymerase a; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.538
atpF
Atpase f0 complex subunit b/b' bacterial/chloroplast; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.520
Your Current Organism:
Trichococcus ilyis
NCBI taxonomy Id: 640938
Other names: DSM 22150, JCM 31247, T. ilyis, Trichococcus ilyis Strepis et al. 2016, Trichococcus sp. DSM 22150, Trichococcus sp. R210, strain R210
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