STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argSArginine-trna ligase. (565 aa)    
Predicted Functional Partners:
guaA
Anthranilate synthase component ii signature; Catalyzes the synthesis of GMP from XMP.
  
  
 0.999
gltX
Glutamyl/glutaminyl-trna synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
  
 0.956
proS
Proline-trna ligase class iia; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
 
 0.950
metG
Aminoacyl-transfer rna synthetases class-i signature; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
 0.949
ileS
Isoleucine-trna ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
  
 0.939
lysS
Lysyl-trna synthetase signature; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 0.914
pyrG
Glutamine amidotransferase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
 
 0.901
leuS
Aminoacyl-transfer rna synthetases class-i signature; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.885
asnS
Aspartyl/asparaginyl-trna synthetase class iib.
   
 0.880
pheT
Phenylalanyl-trna synthetase b3/b4; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.816
Your Current Organism:
Trichococcus ilyis
NCBI taxonomy Id: 640938
Other names: DSM 22150, JCM 31247, T. ilyis, Trichococcus ilyis Strepis et al. 2016, Trichococcus sp. DSM 22150, Trichococcus sp. R210, strain R210
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