Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZQ99021.1 | CZR04680.1 | TR210_1608 | TR210_2139 | Exonuclease rnase t/dna polymerase iii. | Dna polymerase iii delta. | 0.953 |
CZQ99021.1 | CZR10269.1 | TR210_1608 | TR210_2891 | Exonuclease rnase t/dna polymerase iii. | Dna polymerase iii delta subunit. | 0.962 |
CZQ99021.1 | TR210_219 | TR210_1608 | TR210_219 | Exonuclease rnase t/dna polymerase iii. | Dna polymerase helix-hairpin-helix motif. | 0.969 |
CZQ99021.1 | TR210_419 | TR210_1608 | TR210_419 | Exonuclease rnase t/dna polymerase iii. | Dna polymerase iii beta chain central; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiati [...] | 0.971 |
CZQ99021.1 | dinG | TR210_1608 | TR210_191 | Exonuclease rnase t/dna polymerase iii. | Dead/deah box helicase; 3'-5' exonuclease. | 0.890 |
CZQ99021.1 | dnaX | TR210_1608 | TR210_2685 | Exonuclease rnase t/dna polymerase iii. | Dna polymerase iii delta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.962 |
CZQ99021.1 | polC | TR210_1608 | TR210_28 | Exonuclease rnase t/dna polymerase iii. | Dna polymerase iii polc-type n-terminus i; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.866 |
CZR04680.1 | CZQ99021.1 | TR210_2139 | TR210_1608 | Dna polymerase iii delta. | Exonuclease rnase t/dna polymerase iii. | 0.953 |
CZR04680.1 | CZR04688.1 | TR210_2139 | TR210_2140 | Dna polymerase iii delta. | Competence protein. | 0.867 |
CZR04680.1 | CZR07771.1 | TR210_2139 | TR210_2481 | Dna polymerase iii delta. | Hypothetical protein. | 0.963 |
CZR04680.1 | CZR09344.1 | TR210_2139 | TR210_2706 | Dna polymerase iii delta. | Hypothetical protein. | 0.963 |
CZR04680.1 | CZR10269.1 | TR210_2139 | TR210_2891 | Dna polymerase iii delta. | Dna polymerase iii delta subunit. | 0.988 |
CZR04680.1 | TR210_219 | TR210_2139 | TR210_219 | Dna polymerase iii delta. | Dna polymerase helix-hairpin-helix motif. | 0.997 |
CZR04680.1 | TR210_419 | TR210_2139 | TR210_419 | Dna polymerase iii delta. | Dna polymerase iii beta chain central; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiati [...] | 0.998 |
CZR04680.1 | dinG | TR210_2139 | TR210_191 | Dna polymerase iii delta. | Dead/deah box helicase; 3'-5' exonuclease. | 0.919 |
CZR04680.1 | dnaX | TR210_2139 | TR210_2685 | Dna polymerase iii delta. | Dna polymerase iii delta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.992 |
CZR04680.1 | polC | TR210_2139 | TR210_28 | Dna polymerase iii delta. | Dna polymerase iii polc-type n-terminus i; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.893 |
CZR04688.1 | CZR04680.1 | TR210_2140 | TR210_2139 | Competence protein. | Dna polymerase iii delta. | 0.867 |
CZR07771.1 | CZR04680.1 | TR210_2481 | TR210_2139 | Hypothetical protein. | Dna polymerase iii delta. | 0.963 |
CZR07771.1 | CZR09344.1 | TR210_2481 | TR210_2706 | Hypothetical protein. | Hypothetical protein. | 0.864 |
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