STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZR04680.1Dna polymerase iii delta. (338 aa)    
Predicted Functional Partners:
TR210_419
Dna polymerase iii beta chain central; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiati [...]
 
 
 0.998
TR210_219
Dna polymerase helix-hairpin-helix motif.
  
 0.997
dnaX
Dna polymerase iii delta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
 
 0.992
CZR10269.1
Dna polymerase iii delta subunit.
 
 
 0.988
CZR07771.1
Hypothetical protein.
    
 0.963
CZR09344.1
Hypothetical protein.
    
 0.963
CZQ99021.1
Exonuclease rnase t/dna polymerase iii.
    
 0.953
dinG
Dead/deah box helicase; 3'-5' exonuclease.
    
 0.919
polC
Dna polymerase iii polc-type n-terminus i; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 0.893
CZR04688.1
Competence protein.
 
   
 0.867
Your Current Organism:
Trichococcus ilyis
NCBI taxonomy Id: 640938
Other names: DSM 22150, JCM 31247, T. ilyis, Trichococcus ilyis Strepis et al. 2016, Trichococcus sp. DSM 22150, Trichococcus sp. R210, strain R210
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