STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TR210_313Abc transporter permease protein domain; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (295 aa)    
Predicted Functional Partners:
ftsE
Abc transporter; Part of the ABC transporter FtsEX involved in cellular division.
 
 0.999
CZQ98179.1
Peptidase m23.
 
  
 0.763
CZR09405.1
Peptidase m23.
 
  
 0.688
CZR07176.1
Peptidase m23.
 
  
 0.686
TR210_575
Hypothetical protein.
 
  
 0.645
CZR03680.1
Hypothetical protein.
 
  
 0.627
prfB
Peptide chain release factor class i/class ii; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
     
 0.596
CZQ97413.1
Hypothetical protein.
  
     0.570
CZQ98248.1
Lysin motif.
 
  
 0.530
CZR01760.1
Diviva protein.
  
  
 0.509
Your Current Organism:
Trichococcus ilyis
NCBI taxonomy Id: 640938
Other names: DSM 22150, JCM 31247, T. ilyis, Trichococcus ilyis Strepis et al. 2016, Trichococcus sp. DSM 22150, Trichococcus sp. R210, strain R210
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