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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TR210_366Abc transporter. (234 aa)    
Predicted Functional Partners:
TR210_364
Abc transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
TR210_363
Abc transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
TR210_365
Abc transporter.
 
 
0.996
TR210_362
Hypothetical protein.
 
 
 0.993
TR210_367
Hypothetical protein.
 
     0.896
CZR06329.1
Abc transporter.
    
 
0.645
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.614
hisB
Imidazoleglycerol-phosphate dehydratase signature 2.
    
  0.610
CZR05795.1
Alcohol dehydrogenase iron-type; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
  0.564
TR210_774
Abc transporter.
 
   
 
0.545
Your Current Organism:
Trichococcus ilyis
NCBI taxonomy Id: 640938
Other names: DSM 22150, JCM 31247, T. ilyis, Trichococcus ilyis Strepis et al. 2016, Trichococcus sp. DSM 22150, Trichococcus sp. R210, strain R210
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