Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZQ93461.1 | CZR01003.1 | TR210_1146 | TR210_1789 | Maltose/galactoside acetyltransferase. | Chorismate mutase type ii. | 0.894 |
CZQ93461.1 | CZR01030.1 | TR210_1146 | TR210_1793 | Maltose/galactoside acetyltransferase. | Dahp synthetase i/kdsa. | 0.742 |
CZQ93461.1 | TR210_844 | TR210_1146 | TR210_844 | Maltose/galactoside acetyltransferase. | Aminotransferase class i/classii. | 0.645 |
CZQ93461.1 | TR210_917 | TR210_1146 | TR210_917 | Maltose/galactoside acetyltransferase. | Dahp synthetase i/kdsa; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.699 |
CZQ93461.1 | aroB | TR210_1146 | TR210_1792 | Maltose/galactoside acetyltransferase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.622 |
CZQ93461.1 | aroC | TR210_1146 | TR210_1790 | Maltose/galactoside acetyltransferase. | Chorismate synthase signature 1; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.864 |
CZQ93461.1 | aroE | TR210_1146 | TR210_1795 | Maltose/galactoside acetyltransferase. | Quinate/shikimate 5-dehydrogenase/glutamyl-trna reductase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.712 |
CZQ93461.1 | aroK | TR210_1146 | TR210_1796 | Maltose/galactoside acetyltransferase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.847 |
CZQ99888.1 | CZR01003.1 | TR210_1676 | TR210_1789 | Chorismate mutase type ii. | Chorismate mutase type ii. | 0.631 |
CZQ99888.1 | CZR01030.1 | TR210_1676 | TR210_1793 | Chorismate mutase type ii. | Dahp synthetase i/kdsa. | 0.800 |
CZQ99888.1 | TR210_844 | TR210_1676 | TR210_844 | Chorismate mutase type ii. | Aminotransferase class i/classii. | 0.673 |
CZQ99888.1 | TR210_917 | TR210_1676 | TR210_917 | Chorismate mutase type ii. | Dahp synthetase i/kdsa; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.683 |
CZQ99888.1 | aroB | TR210_1676 | TR210_1792 | Chorismate mutase type ii. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.749 |
CZQ99888.1 | aroC | TR210_1676 | TR210_1790 | Chorismate mutase type ii. | Chorismate synthase signature 1; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.921 |
CZQ99888.1 | aroE | TR210_1676 | TR210_1795 | Chorismate mutase type ii. | Quinate/shikimate 5-dehydrogenase/glutamyl-trna reductase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.796 |
CZQ99888.1 | aroK | TR210_1676 | TR210_1796 | Chorismate mutase type ii. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.815 |
CZR01003.1 | CZQ93461.1 | TR210_1789 | TR210_1146 | Chorismate mutase type ii. | Maltose/galactoside acetyltransferase. | 0.894 |
CZR01003.1 | CZQ99888.1 | TR210_1789 | TR210_1676 | Chorismate mutase type ii. | Chorismate mutase type ii. | 0.631 |
CZR01003.1 | CZR01030.1 | TR210_1789 | TR210_1793 | Chorismate mutase type ii. | Dahp synthetase i/kdsa. | 0.997 |
CZR01003.1 | TR210_739 | TR210_1789 | TR210_739 | Chorismate mutase type ii. | Ketose-bisphosphate aldolase class-ii. | 0.611 |
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