Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZR09038.1 | TR210_934 | TR210_2663 | TR210_934 | Hypothetical protein. | Tetr bacterial regulatory protein hth signature. | 0.435 |
CZR09038.1 | TR210_936 | TR210_2663 | TR210_936 | Hypothetical protein. | Short-chain dehydrogenase/reductase sdr; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.532 |
TR210_933 | TR210_934 | TR210_933 | TR210_934 | Alpha/beta hydrolase fold. | Tetr bacterial regulatory protein hth signature. | 0.474 |
TR210_933 | TR210_935 | TR210_933 | TR210_935 | Alpha/beta hydrolase fold. | Aldolase-type tim barrel. | 0.463 |
TR210_934 | CZR09038.1 | TR210_934 | TR210_2663 | Tetr bacterial regulatory protein hth signature. | Hypothetical protein. | 0.435 |
TR210_934 | TR210_933 | TR210_934 | TR210_933 | Tetr bacterial regulatory protein hth signature. | Alpha/beta hydrolase fold. | 0.474 |
TR210_934 | TR210_935 | TR210_934 | TR210_935 | Tetr bacterial regulatory protein hth signature. | Aldolase-type tim barrel. | 0.794 |
TR210_934 | TR210_936 | TR210_934 | TR210_936 | Tetr bacterial regulatory protein hth signature. | Short-chain dehydrogenase/reductase sdr; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.523 |
TR210_934 | TR210_937 | TR210_934 | TR210_937 | Tetr bacterial regulatory protein hth signature. | Hypothetical protein. | 0.522 |
TR210_934 | TR210_938 | TR210_934 | TR210_938 | Tetr bacterial regulatory protein hth signature. | Hypothetical protein. | 0.522 |
TR210_934 | TR210_939 | TR210_934 | TR210_939 | Tetr bacterial regulatory protein hth signature. | Thiolase active site; Belongs to the thiolase-like superfamily. Thiolase family. | 0.548 |
TR210_934 | TR210_940 | TR210_934 | TR210_940 | Tetr bacterial regulatory protein hth signature. | Amp-dependent synthetase/ligase. | 0.543 |
TR210_934 | TR210_941 | TR210_934 | TR210_941 | Tetr bacterial regulatory protein hth signature. | Bioy protein. | 0.486 |
TR210_934 | pth | TR210_934 | TR210_2013 | Tetr bacterial regulatory protein hth signature. | Peptidyl-trna hydrolase signature 2; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.440 |
TR210_935 | TR210_933 | TR210_935 | TR210_933 | Aldolase-type tim barrel. | Alpha/beta hydrolase fold. | 0.463 |
TR210_935 | TR210_934 | TR210_935 | TR210_934 | Aldolase-type tim barrel. | Tetr bacterial regulatory protein hth signature. | 0.794 |
TR210_935 | TR210_936 | TR210_935 | TR210_936 | Aldolase-type tim barrel. | Short-chain dehydrogenase/reductase sdr; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.756 |
TR210_935 | TR210_937 | TR210_935 | TR210_937 | Aldolase-type tim barrel. | Hypothetical protein. | 0.531 |
TR210_935 | TR210_938 | TR210_935 | TR210_938 | Aldolase-type tim barrel. | Hypothetical protein. | 0.522 |
TR210_935 | TR210_939 | TR210_935 | TR210_939 | Aldolase-type tim barrel. | Thiolase active site; Belongs to the thiolase-like superfamily. Thiolase family. | 0.742 |
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