Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD38814.1 | SFD38834.1 | SAMN05216238_101103 | SAMN05216238_101104 | Competence protein CoiA-like family, contains a predicted nuclease domain. | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | 0.575 |
SFD38814.1 | mecA | SAMN05216238_101103 | SAMN05216238_101102 | Competence protein CoiA-like family, contains a predicted nuclease domain. | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.715 |
SFD38834.1 | SFD38814.1 | SAMN05216238_101104 | SAMN05216238_101103 | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | Competence protein CoiA-like family, contains a predicted nuclease domain. | 0.575 |
SFD38834.1 | SFD38852.1 | SAMN05216238_101104 | SAMN05216238_101105 | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | Multidrug resistance protein. | 0.529 |
SFD38834.1 | SFD80422.1 | SAMN05216238_101104 | SAMN05216238_104152 | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | Flagellar motor switch protein FliM. | 0.497 |
SFD38834.1 | SFE28890.1 | SAMN05216238_101104 | SAMN05216238_11228 | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.404 |
SFD38834.1 | mecA | SAMN05216238_101104 | SAMN05216238_101102 | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.439 |
SFD38852.1 | SFD38834.1 | SAMN05216238_101105 | SAMN05216238_101104 | Multidrug resistance protein. | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | 0.529 |
SFD80422.1 | SFD38834.1 | SAMN05216238_104152 | SAMN05216238_101104 | Flagellar motor switch protein FliM. | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | 0.497 |
SFE28890.1 | SFD38834.1 | SAMN05216238_11228 | SAMN05216238_101104 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | 0.404 |
mecA | SFD38814.1 | SAMN05216238_101102 | SAMN05216238_101103 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | Competence protein CoiA-like family, contains a predicted nuclease domain. | 0.715 |
mecA | SFD38834.1 | SAMN05216238_101102 | SAMN05216238_101104 | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | Oligopeptidase F. Metallo peptidase. MEROPS family M03B. | 0.439 |