Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD39621.1 | SFD41671.1 | SAMN05216238_101144 | SAMN05216238_101244 | hydroxymethylglutaryl-CoA synthase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.959 |
SFD39621.1 | SFD41698.1 | SAMN05216238_101144 | SAMN05216238_101245 | hydroxymethylglutaryl-CoA synthase. | acetoacetyl-CoA synthetase. | 0.401 |
SFD39621.1 | SFD41722.1 | SAMN05216238_101144 | SAMN05216238_101246 | hydroxymethylglutaryl-CoA synthase. | Acetyl-CoA acetyltransferase. | 0.959 |
SFD39621.1 | SFD41747.1 | SAMN05216238_101144 | SAMN05216238_101247 | hydroxymethylglutaryl-CoA synthase. | Hypothetical protein. | 0.975 |
SFD39621.1 | SFD43190.1 | SAMN05216238_101144 | SAMN05216238_101310 | hydroxymethylglutaryl-CoA synthase. | Hypothetical protein. | 0.975 |
SFD39621.1 | SFD43528.1 | SAMN05216238_101144 | SAMN05216238_101325 | hydroxymethylglutaryl-CoA synthase. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.450 |
SFD39621.1 | SFD95183.1 | SAMN05216238_101144 | SAMN05216238_106106 | hydroxymethylglutaryl-CoA synthase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.924 |
SFD41671.1 | SFD39621.1 | SAMN05216238_101244 | SAMN05216238_101144 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | hydroxymethylglutaryl-CoA synthase. | 0.959 |
SFD41671.1 | SFD41698.1 | SAMN05216238_101244 | SAMN05216238_101245 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetoacetyl-CoA synthetase. | 0.836 |
SFD41671.1 | SFD41722.1 | SAMN05216238_101244 | SAMN05216238_101246 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase. | 0.773 |
SFD41671.1 | SFD41747.1 | SAMN05216238_101244 | SAMN05216238_101247 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.966 |
SFD41671.1 | SFD43190.1 | SAMN05216238_101244 | SAMN05216238_101310 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Hypothetical protein. | 0.859 |
SFD41671.1 | SFD43528.1 | SAMN05216238_101244 | SAMN05216238_101325 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.752 |
SFD41671.1 | SFD87744.1 | SAMN05216238_101244 | SAMN05216238_10588 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.835 |
SFD41671.1 | SFD95183.1 | SAMN05216238_101244 | SAMN05216238_106106 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.992 |
SFD41671.1 | SFE08972.1 | SAMN05216238_101244 | SAMN05216238_10853 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.830 |
SFD41671.1 | lcdH | SAMN05216238_101244 | SAMN05216238_11140 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | 0.778 |
SFD41698.1 | SFD39621.1 | SAMN05216238_101245 | SAMN05216238_101144 | acetoacetyl-CoA synthetase. | hydroxymethylglutaryl-CoA synthase. | 0.401 |
SFD41698.1 | SFD41671.1 | SAMN05216238_101245 | SAMN05216238_101244 | acetoacetyl-CoA synthetase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.836 |
SFD41698.1 | SFD41722.1 | SAMN05216238_101245 | SAMN05216238_101246 | acetoacetyl-CoA synthetase. | Acetyl-CoA acetyltransferase. | 0.836 |
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