STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD41722.1Acetyl-CoA acetyltransferase. (386 aa)    
Predicted Functional Partners:
SFD41747.1
Hypothetical protein.
 
 0.992
SFD95183.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.991
SFD43190.1
Hypothetical protein.
 
 0.966
SFD39621.1
hydroxymethylglutaryl-CoA synthase.
  
 0.959
SFD41698.1
acetoacetyl-CoA synthetase.
  
 
  0.836
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
 0.808
SFD87744.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.778
SFE08972.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.778
SFD41671.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.773
SFD43528.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.752
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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