Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFD40545.1 | SFD42696.1 | SAMN05216238_101190 | SAMN05216238_101289 | Protein of unknown function. | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | 0.859 |
| SFD40545.1 | SFD79473.1 | SAMN05216238_101190 | SAMN05216238_104110 | Protein of unknown function. | ATP-dependent protease ClpP, protease subunit. | 0.602 |
| SFD40545.1 | clpP | SAMN05216238_101190 | SAMN05216238_106159 | Protein of unknown function. | ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.602 |
| SFD40545.1 | dnaJ | SAMN05216238_101190 | SAMN05216238_102191 | Protein of unknown function. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.982 |
| SFD40545.1 | grpE | SAMN05216238_101190 | SAMN05216238_102193 | Protein of unknown function. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.967 |
| SFD42696.1 | SFD40545.1 | SAMN05216238_101289 | SAMN05216238_101190 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Protein of unknown function. | 0.859 |
| SFD42696.1 | SFD66481.1 | SAMN05216238_101289 | SAMN05216238_10354 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Plasmid segregation protein ParM. | 0.859 |
| SFD42696.1 | SFD79473.1 | SAMN05216238_101289 | SAMN05216238_104110 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | ATP-dependent protease ClpP, protease subunit. | 0.934 |
| SFD42696.1 | SFE00135.1 | SAMN05216238_101289 | SAMN05216238_10723 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Protein of unknown function. | 0.859 |
| SFD42696.1 | clpP | SAMN05216238_101289 | SAMN05216238_106159 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.948 |
| SFD42696.1 | dnaJ | SAMN05216238_101289 | SAMN05216238_102191 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.866 |
| SFD42696.1 | dnaK | SAMN05216238_101289 | SAMN05216238_102192 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.873 |
| SFD42696.1 | grpE | SAMN05216238_101289 | SAMN05216238_102193 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.818 |
| SFD42696.1 | mecA | SAMN05216238_101289 | SAMN05216238_101102 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.857 |
| SFD42696.1 | mecA-2 | SAMN05216238_101289 | SAMN05216238_10212 | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | Adapter protein MecA 1/2; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.835 |
| SFD66481.1 | SFD42696.1 | SAMN05216238_10354 | SAMN05216238_101289 | Plasmid segregation protein ParM. | ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family. | 0.859 |
| SFD66481.1 | SFD79473.1 | SAMN05216238_10354 | SAMN05216238_104110 | Plasmid segregation protein ParM. | ATP-dependent protease ClpP, protease subunit. | 0.602 |
| SFD66481.1 | clpP | SAMN05216238_10354 | SAMN05216238_106159 | Plasmid segregation protein ParM. | ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.602 |
| SFD66481.1 | dnaJ | SAMN05216238_10354 | SAMN05216238_102191 | Plasmid segregation protein ParM. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.982 |
| SFD66481.1 | grpE | SAMN05216238_10354 | SAMN05216238_102193 | Plasmid segregation protein ParM. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.967 |
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