STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD44122.1MotA/TolQ/ExbB proton channel family protein. (605 aa)    
Predicted Functional Partners:
SFD44140.1
Chemotaxis protein MotB.
 
 
 0.974
SFD79952.1
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
  0.904
SFE35733.1
rsbT co-antagonist protein RsbR.
  
  0.904
SFE35760.1
rsbT antagonist protein RsbS.
  
  0.904
SFD61556.1
Chemotaxis protein MotB.
 
 
   0.871
sspH
Small acid-soluble spore protein H (minor); Belongs to the SspH family.
  
     0.741
SFE34182.1
Protein of unknown function.
  
     0.710
SFD66945.1
Membrane-bound acyltransferase YfiQ, involved in biofilm formation.
  
     0.702
SFD70242.1
Hypothetical protein.
  
     0.694
SFE25289.1
Hypothetical protein.
  
     0.683
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.