STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD44158.1Conserved hypothetical protein (putative transposase or invertase). (386 aa)    
Predicted Functional Partners:
SFD44174.1
Hypothetical protein.
       0.634
SFD44091.1
Hypothetical protein.
 
     0.622
SFD86743.1
Hypothetical protein.
  
     0.565
SFD44122.1
MotA/TolQ/ExbB proton channel family protein.
       0.496
SFD44140.1
Chemotaxis protein MotB.
       0.496
SFD87079.1
glutamate:Na+ symporter, ESS family.
  
     0.495
SFE04281.1
ABC-2 type transport system permease protein.
  
     0.481
SFE18104.1
Hypothetical protein.
  
     0.443
SFE24198.1
N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit.
  
     0.423
SFE18085.1
TolB protein.
  
     0.416
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.