STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD44880.1Protein SCO1/2. (189 aa)    
Predicted Functional Partners:
SFD83139.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.838
SFD37535.1
Cytochrome c oxidase subunit 2.
 
 
 0.738
SFD96610.1
Cytochrome c oxidase subunit 2.
 
 
 0.710
ctaA
Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 1 subfamily.
 
 
 0.693
SFD93816.1
Thiol-disulfide isomerase or thioredoxin.
  
 
 0.654
SFD96471.1
YtkA-like.
 
   
 0.648
SFD83846.1
Thiol-disulfide isomerase or thioredoxin.
  
 
 0.647
SFD53968.1
Protein of unknown function.
  
     0.640
SFE46057.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
  
   
 0.640
SFD83066.1
Putative membrane protein.
 
   
 0.601
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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