STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD36458.1Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (365 aa)    
Predicted Functional Partners:
SFE37822.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.998
SFE37844.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.997
SFE48776.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.995
SFE48749.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.994
SFE37799.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.962
SFE48799.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.952
SFD88583.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family.
   
 
 0.746
SFE37700.1
PTS system IIA component, Glc family /PTS system IIB component, Glc family /PTS system IIC component, Glc family.
   
 
 0.746
SFD36482.1
PucR C-terminal helix-turn-helix domain-containing protein.
 
  
 0.693
SFD70766.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
  0.677
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.