Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD55125.1 | SFD55180.1 | SAMN05216238_102176 | SAMN05216238_102178 | Undecaprenol kinase/diacylglycerol kinase (ATP). | Hypothetical protein. | 0.814 |
SFD55125.1 | SFD55203.1 | SAMN05216238_102176 | SAMN05216238_102179 | Undecaprenol kinase/diacylglycerol kinase (ATP). | Phosphate starvation-inducible protein PhoH. | 0.679 |
SFD55125.1 | SFD55238.1 | SAMN05216238_102176 | SAMN05216238_102180 | Undecaprenol kinase/diacylglycerol kinase (ATP). | Similar to stage IV sporulation protein. | 0.622 |
SFD55125.1 | SFD55267.1 | SAMN05216238_102176 | SAMN05216238_102181 | Undecaprenol kinase/diacylglycerol kinase (ATP). | Sporulation protein YqfC. | 0.586 |
SFD55125.1 | SFD77812.1 | SAMN05216238_102176 | SAMN05216238_10443 | Undecaprenol kinase/diacylglycerol kinase (ATP). | GTPase Era, involved in 16S rRNA processing. | 0.486 |
SFD55125.1 | era | SAMN05216238_102176 | SAMN05216238_102175 | Undecaprenol kinase/diacylglycerol kinase (ATP). | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.718 |
SFD55125.1 | recO | SAMN05216238_102176 | SAMN05216238_102173 | Undecaprenol kinase/diacylglycerol kinase (ATP). | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.605 |
SFD55125.1 | ybeY | SAMN05216238_102176 | SAMN05216238_102177 | Undecaprenol kinase/diacylglycerol kinase (ATP). | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.969 |
SFD55180.1 | SFD55125.1 | SAMN05216238_102178 | SAMN05216238_102176 | Hypothetical protein. | Undecaprenol kinase/diacylglycerol kinase (ATP). | 0.814 |
SFD55180.1 | SFD55203.1 | SAMN05216238_102178 | SAMN05216238_102179 | Hypothetical protein. | Phosphate starvation-inducible protein PhoH. | 0.629 |
SFD55180.1 | SFD55238.1 | SAMN05216238_102178 | SAMN05216238_102180 | Hypothetical protein. | Similar to stage IV sporulation protein. | 0.622 |
SFD55180.1 | SFD55267.1 | SAMN05216238_102178 | SAMN05216238_102181 | Hypothetical protein. | Sporulation protein YqfC. | 0.642 |
SFD55180.1 | era | SAMN05216238_102178 | SAMN05216238_102175 | Hypothetical protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.558 |
SFD55180.1 | recO | SAMN05216238_102178 | SAMN05216238_102173 | Hypothetical protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.499 |
SFD55180.1 | ybeY | SAMN05216238_102178 | SAMN05216238_102177 | Hypothetical protein. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.852 |
SFD55203.1 | SFD55125.1 | SAMN05216238_102179 | SAMN05216238_102176 | Phosphate starvation-inducible protein PhoH. | Undecaprenol kinase/diacylglycerol kinase (ATP). | 0.679 |
SFD55203.1 | SFD55180.1 | SAMN05216238_102179 | SAMN05216238_102178 | Phosphate starvation-inducible protein PhoH. | Hypothetical protein. | 0.629 |
SFD55203.1 | SFD55238.1 | SAMN05216238_102179 | SAMN05216238_102180 | Phosphate starvation-inducible protein PhoH. | Similar to stage IV sporulation protein. | 0.800 |
SFD55203.1 | SFD55267.1 | SAMN05216238_102179 | SAMN05216238_102181 | Phosphate starvation-inducible protein PhoH. | Sporulation protein YqfC. | 0.747 |
SFD55203.1 | SFD76817.1 | SAMN05216238_102179 | SAMN05216238_1044 | Phosphate starvation-inducible protein PhoH. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.603 |
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