STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD61937.1Hypothetical protein. (307 aa)    
Predicted Functional Partners:
SFD61954.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
  
    0.803
SFD96793.1
Flagellar protein FliT.
  
    0.781
SFD61976.1
DeoR-like helix-turn-helix domain-containing protein.
 
     0.777
SFD80443.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
    0.775
SFD80609.1
Flagellar FliJ protein.
  
     0.774
SFD54327.1
Hypothetical protein.
  
     0.771
SFD96922.1
FlgN protein.
  
     0.759
SFE08721.1
Uncharacterized beta-barrel protein YwiB, DUF1934 family.
  
     0.755
SFD38633.1
Protein of unknown function.
  
     0.753
SFD58727.1
Tetratricopeptide repeat-containing protein.
  
     0.747
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.