STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD53058.1Stage III sporulation protein AG. (211 aa)    
Predicted Functional Partners:
SFD53086.1
Stage III sporulation protein AF.
 
  
 0.989
SFD53034.1
Stage III sporulation protein AH.
 
  
 0.987
SFD53110.1
Stage III sporulation protein AE.
 
  
 0.983
SFD53189.1
Stage III sporulation protein AB.
 
  
 0.980
SFD53216.1
Stage III sporulation protein AA.
 
  
 0.979
SFD53136.1
Stage III sporulation protein AD.
 
  
 0.956
SFD53162.1
Stage III sporulation protein AC.
 
  
 0.949
SFD73362.1
Stage II sporulation protein E.
  
   
 0.795
SFD52700.1
Stage IV sporulation protein B.
 
     0.783
SFE10166.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
  
 0.783
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.