STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD67614.1NADH dehydrogenase. (353 aa)    
Predicted Functional Partners:
SFD94183.1
NADH dehydrogenase.
 
  
 
0.932
SFD45877.1
NADH dehydrogenase.
 
  
 
0.931
SFE35270.1
Thioredoxin reductase (NADPH).
    
 0.816
SFE29110.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
 
0.693
SFD56303.1
Multisubunit sodium/proton antiporter, MrpA subunit.
  
 
 0.664
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.583
SFD67595.1
LytTr DNA-binding domain-containing protein.
  
    0.530
cysI
Sulfite reductase (NADPH) beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.525
SFD83254.1
Hypothetical protein.
  
  
  0.498
SFE08906.1
Fe-S oxidoreductase.
 
 
  0.482
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.