STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD68452.1Inner membrane protein. (208 aa)    
Predicted Functional Partners:
SFD45827.1
Germination protein, Ger(x)C family.
  
     0.665
SFD68731.1
PrcB C-terminal.
  
     0.635
SFD77603.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
  
     0.605
SFD65863.1
Hypothetical protein.
  
     0.595
SFD46295.1
Uncharacterized conserved protein YjgD, DUF1641 family.
  
     0.567
SFD84082.1
PilZ domain-containing protein.
  
     0.546
SFE34423.1
Hypothetical protein.
  
     0.516
SFD38046.1
Molybdopterin-guanine dinucleotide biosynthesis protein B.
  
     0.511
SFD94669.1
Pilus assembly protein CpaB.
  
     0.502
SFD68412.1
Putative transcriptional regulator.
       0.477
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.