STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD65906.1Hypothetical protein. (429 aa)    
Predicted Functional Partners:
SFD87545.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.914
SFD80399.1
Flagellar motor switch protein FliN/FliY.
   
 
  0.911
SFE04818.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.690
SFD93163.1
Hypothetical protein.
  
     0.655
SFD59612.1
Hypothetical protein.
  
     0.569
SFD99622.1
Signal transduction histidine kinase.
 
  
 0.568
SFD59653.1
ABC-2 type transport system permease protein.
  
     0.492
SFD59630.1
ABC-2 type transport system permease protein.
  
     0.490
SFE25259.1
Hypothetical protein.
  
     0.482
SFE26307.1
Tetratricopeptide repeat-containing protein.
  
     0.478
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.