STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD73183.1Polysaccharide transporter, PST family. (527 aa)    
Predicted Functional Partners:
SFD73227.1
Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.
  
    0.831
SFD73207.1
Tetrapyrrole methylase family protein / MazG family protein.
  
    0.810
SFD73284.1
Spore cortex biosynthesis protein YabQ.
 
   
 0.710
SFD73257.1
Sporulation protein YabP.
  
  
 0.689
SFD73308.1
Cell division protein DivIC.
 
     0.688
SFD73335.1
S1 RNA binding domain protein.
 
     0.618
SFD96626.1
Hypothetical protein.
  
     0.589
SFE42014.1
Hypothetical protein.
  
     0.580
SFE49750.1
Uncharacterized protein YpmS.
  
    0.578
SFD57208.1
N-acetylmuramoyl-L-alanine amidase.
  
   
 0.563
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.