STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD73284.1Spore cortex biosynthesis protein YabQ. (199 aa)    
Predicted Functional Partners:
SFD73257.1
Sporulation protein YabP.
 
  
 0.973
SFD73227.1
Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain.
  
    0.817
SFD73308.1
Cell division protein DivIC.
  
    0.808
SFD72408.1
Inhibitor of the pro-sigma K processing machinery.
  
   
 0.786
SFD53319.1
Conserved membrane protein YqhR.
  
     0.771
SFD58404.1
Stage VI sporulation protein D.
  
     0.768
SFD82954.1
Putative coat protein.
  
     0.768
SFD57534.1
Putative membrane protein, TIGR04086 family.
  
     0.767
SFD73113.1
Protein of unknown function.
 
    0.766
SFD54522.1
MFS transporter, YQGE family, putative transporter.
  
     0.765
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.