STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD67412.1Capsular exopolysaccharide family. (219 aa)    
Predicted Functional Partners:
SFD67432.1
Capsular polysaccharide biosynthesis protein.
 
 0.990
SFD86815.1
Capsular polysaccharide biosynthesis protein.
 
 0.976
SFD67232.1
Sugar transferase EpsL.
 
 
 0.968
SFD86871.1
Protein-tyrosine phosphatase.
  
 0.864
SFD86854.1
Protein-tyrosine phosphatase.
  
 0.863
SFD66616.1
Uncharacterised nucleotidyltransferase.
  
 0.790
SFD86702.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.775
SFD87022.1
O-antigen biosynthesis protein WbqP.
 
 
 0.772
SFD67390.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.706
SFD86886.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.505
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.