STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD81943.1Peroxiredoxin, Ohr subfamily. (143 aa)    
Predicted Functional Partners:
SFD45159.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.747
SFD95570.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.747
SFD88190.1
GAF domain-containing protein.
   
    0.685
addB
DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.
   
    0.682
SFD78814.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.663
SFD95283.1
Protein required for attachment to host cells.
 
    0.639
SFD81970.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
     
 0.598
SFE24252.1
General stress protein 26.
  
    0.592
SFD71996.1
Protease I.
  
    0.583
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.482
Your Current Organism:
Lentibacillus persicus
NCBI taxonomy Id: 640948
Other names: CCM 7683, CECT 7524, DSM 22530, L. persicus, LMG 25304, LMG:25304, Lentibacillus persicus Sanchez-Porro et al. 2010, Lentibacillus sp. Amb31, strain Amb31
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